Microarray analysis of RAW 264.7 cells treated with Kdo₂-lipid A (KLA) and compactin (full time course)

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Kdo₂-Lipid A / compactin gene array data - treatment:control ratios

KEGG pathway: Hedgehog signaling pathway (mmu04340)

Legend:	: View data/graphs for replicates

Gene symbol	Time course plot	Accession	Description	Treatment	30min	1hr	2hr	4hr	8hr	12hr	24hr
Bmp2	KLA Compactin Compactin+KLA	NM_007553	bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.910	0.970	1.020	0.950	1.040	1.060	0.990
				Compactin	1.020	0.960	1.060	0.940	1.000	1.010	1.030
				KLA/Compactin	1.170	1.040	0.970	0.960	1.000	0.970	1.050

Bmp2	KLA Compactin Compactin+KLA	NM_007553		bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.940	1.020	0.990	0.970	1.050	1.020	0.960
					Compactin	1.000	0.930	1.040	1.030	0.970	0.950	1.000
					KLA/Compactin	0.940	1.020	1.030	1.020	1.060	1.030	1.040

Bmp2	KLA Compactin Compactin+KLA	NM_007553	bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.960	1.050	0.990	0.980	1.110	1.060	1.050
				Compactin	0.950	1.060	0.950	0.990	0.990	0.950	1.130
				KLA/Compactin	0.960	0.950	0.990	1.040	1.010	0.920	0.970

Bmp2	KLA Compactin Compactin+KLA	NM_007553		bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.970	0.930	1.020	1.060	1.020	1.030	1.020
					Compactin	0.960	0.990	1.010	1.000	0.960	0.980	1.080
					KLA/Compactin	1.000	0.990	0.970	1.040	0.970	0.910	0.920

Bmp2	KLA Compactin Compactin+KLA	NM_007553	bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.970	1.060	1.020	0.970	1.000	1.040	0.950
				Compactin	0.960	1.030	1.010	1.040	0.970	0.960	1.060
				KLA/Compactin	1.000	1.130	0.940	1.020	1.020	1.000	0.960

Bmp2	KLA Compactin Compactin+KLA	NM_007553		bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.980	1.010	0.920	1.100	1.000	1.000	0.970
					Compactin	1.030	0.980	1.020	1.010	0.950	0.970	1.000
					KLA/Compactin	1.000	0.990	0.980	1.060	1.000	1.060	0.970

Bmp2	KLA Compactin Compactin+KLA	NM_007553	bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.990	0.960	1.010	0.990	1.010	1.000	1.040
				Compactin	0.960	0.980	0.990	0.940	1.020	1.060	1.110
				KLA/Compactin	0.940	1.020	0.990	0.960	0.880	1.030	1.040

Bmp2	KLA Compactin Compactin+KLA	NM_007553		bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	0.990	0.960	1.010	1.000	1.040	1.000	1.000
					Compactin	0.960	0.960	1.050	1.000	0.970	0.940	1.080
					KLA/Compactin	1.040	0.970	0.930	0.990	1.020	0.960	1.040

Bmp2	KLA Compactin Compactin+KLA	NM_007553	bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	1.000	0.990	0.960	1.110	1.030	1.010	0.970
				Compactin	0.910	1.020	0.990	1.020	1.010	0.960	1.080
				KLA/Compactin	1.030	1.010	0.940	0.980	1.340	1.000	0.980

Bmp2	KLA Compactin Compactin+KLA	NM_007553		bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	1.020	1.000	0.940	1.040	0.990	1.020	0.920
					Compactin	1.090	1.060	1.050	1.010	1.040	1.040	0.950
					KLA/Compactin	0.980	1.000	0.990	1.020	1.000	1.050	0.960

Bmp2	KLA Compactin Compactin+KLA	NM_007553	bone morphogenetic protein 2 (Bmp2), mRNA [NM_007553]	KLA	1.060	0.990	0.960	1.050	1.020	1.060	1.040
				Compactin	0.980	1.020	1.050	1.040	0.930	0.990	1.400
				KLA/Compactin	1.040	0.960	1.050	0.970	0.990	0.980	0.960

Bmp4	KLA Compactin Compactin+KLA	NM_007554		bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	0.930	0.970	1.080	1.050	1.020	0.950	1.010
					Compactin	1.000	0.890	1.020	1.010	0.980	0.950	0.950
					KLA/Compactin	0.950	0.930	0.980	0.980	0.990	0.990	0.960

Bmp4	KLA Compactin Compactin+KLA	NM_007554	bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	0.940	0.910	0.950	1.010	1.030	0.980	1.030
				Compactin	0.960	0.990	0.950	0.980	1.000	0.960	0.990
				KLA/Compactin	0.970	1.010	0.960	1.040	1.070	1.030	1.030

Bmp4	KLA Compactin Compactin+KLA	NM_007554		bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	0.970	0.950	1.000	1.070	1.040	1.060	1.120
					Compactin	0.930	0.940	1.010	1.050	0.970	1.040	0.920
					KLA/Compactin	0.930	1.030	0.960	1.090	1.040	1.090	1.000

Bmp4	KLA Compactin Compactin+KLA	NM_007554	bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	0.980	0.970	0.930	1.290	1.030	1.050	1.000
				Compactin	1.060	0.920	1.020	1.080	0.940	1.010	0.930
				KLA/Compactin	0.950	1.020	0.970	1.010	1.000	0.990	1.000

Bmp4	KLA Compactin Compactin+KLA	NM_007554		bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	0.990	1.010	1.060	1.070	0.990	1.020	1.060
					Compactin	0.940	1.000	0.940	0.950	1.010	0.970	1.020
					KLA/Compactin	0.930	1.000	0.960	1.000	1.030	1.000	0.960

Bmp4	KLA Compactin Compactin+KLA	NM_007554	bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	1.000	0.940	1.000	1.090	0.980	1.010	0.980
				Compactin	1.030	1.010	0.960	1.010	0.990	1.040	0.960
				KLA/Compactin	0.970	1.040	1.040	1.040	1.050	1.040	1.000

Bmp4	KLA Compactin Compactin+KLA	NM_007554		bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	1.000	0.950	1.020	1.040	1.020	1.050	1.140
					Compactin	0.940	0.930	1.020	0.950	0.890	0.950	0.940
					KLA/Compactin	0.940	0.980	0.980	0.970	0.960	1.010	1.000

Bmp4	KLA Compactin Compactin+KLA	NM_007554	bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	1.000	1.050	0.970	1.080	0.960	1.000	1.340
				Compactin	0.980	0.980	0.950	1.000	0.940	1.010	0.970
				KLA/Compactin	0.970	1.000	1.050	0.940	1.010	1.020	1.130

Bmp4	KLA Compactin Compactin+KLA	NM_007554		bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	1.030	0.950	1.000	0.940	1.000	0.950	1.020
					Compactin	1.040	0.920	1.010	0.980	0.990	0.930	0.970
					KLA/Compactin	0.950	0.970	0.960	1.080	0.920	0.970	1.040

Bmp4	KLA Compactin Compactin+KLA	NM_007554	bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	1.030	0.960	1.000	0.970	1.030	1.010	1.060
				Compactin	0.970	0.950	1.000	1.060	0.990	1.040	0.960
				KLA/Compactin	0.990	0.920	0.990	0.970	1.080	1.020	0.990

Bmp4	KLA Compactin Compactin+KLA	NM_007554		bone morphogenetic protein 4 (Bmp4), mRNA [NM_007554]	KLA	1.040	0.970	1.010	1.010	1.050	1.080	1.070
					Compactin	0.990	0.920	0.990	0.990	0.940	1.050	0.970
					KLA/Compactin	0.970	1.000	0.960	1.040	1.030	1.020	1.030

Btrc	KLA Compactin Compactin+KLA	NM_009771	beta-transducin repeat containing protein (Btrc), transcript variant 2, mRNA [NM_009771]	KLA	0.970	1.040	1.010	0.990	1.030	1.090	1.290
				Compactin	1.060	1.010	1.030	0.990	0.980	0.980	1.040
				KLA/Compactin	0.960	1.030	0.960	0.960	1.030	1.290	1.270

Csnk1a1	KLA Compactin Compactin+KLA	AK017353		6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430427P18 product:unclassifiable, full insert sequence. [AK017353]	KLA	1.010	1.060	1.060	1.170	0.920	0.800	0.620
					Compactin	1.010	1.060	1.050	1.100	1.090	0.860	1.020
					KLA/Compactin	1.100	1.120	1.070	1.310	1.050	1.040	0.530

Csnk1a1	KLA Compactin Compactin+KLA	AK152387	bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830067L20 product:casein kinase 1, alpha 1, full insert sequence [AK152387]	KLA	1.080	1.080	0.890	1.040	1.240	1.140	1.310
				Compactin	0.890	0.980	0.950	0.920	1.200	1.260	0.950
				KLA/Compactin	0.850	1.010	1.020	1.120	1.000	1.350	2.080

Csnk1a1	KLA Compactin Compactin+KLA	NM_146087		casein kinase 1, alpha 1 (Csnk1a1), mRNA [NM_146087]	KLA	0.890	1.000	0.950	0.990	1.320	1.110	1.220
					Compactin	0.840	0.950	1.000	0.860	0.880	1.030	1.070
					KLA/Compactin	0.910	1.020	1.110	1.000	1.040	1.240	1.570

Csnk1a1	KLA Compactin Compactin+KLA	NM_146087	casein kinase 1, alpha 1 (Csnk1a1), mRNA [NM_146087]	KLA	0.950	1.050	1.180	1.140	1.260	1.470	1.620
				Compactin	1.100	1.070	1.010	1.230	1.060	1.030	1.230
				KLA/Compactin	1.150	1.040	1.150	1.190	1.300	1.500	1.730

Csnk1a1	KLA Compactin Compactin+KLA	NM_146087		casein kinase 1, alpha 1 (Csnk1a1), mRNA [NM_146087]	KLA	1.550	1.180	1.410	1.460	1.410	1.520	1.540
					Compactin	1.210	1.150	1.150	1.310	1.140	0.870	1.170
					KLA/Compactin	1.180	1.150	1.170	1.400	1.820	1.440	1.560

Csnk1d	KLA Compactin Compactin+KLA	NM_027874	casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA [NM_027874]	KLA	0.910	0.770	0.980	0.810	0.790	0.730	0.580
				Compactin	1.050	0.840	0.960	1.060	1.040	0.980	0.970
				KLA/Compactin	0.940	0.850	0.880	0.780	0.940	0.700	0.500

Csnk1d	KLA Compactin Compactin+KLA	NM_027874		casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA [NM_027874]	KLA	1.060	1.080	1.150	0.880	0.760	0.800	0.430
					Compactin	1.150	1.010	1.140	1.100	1.030	1.020	1.000
					KLA/Compactin	1.100	0.990	1.130	0.920	0.820	0.680	0.360

Csnk1d	KLA Compactin Compactin+KLA	NM_027874	casein kinase 1, delta (Csnk1d), transcript variant 2, mRNA [NM_027874]	KLA	1.630	1.360	1.130	1.300	1.380	1.590	2.070
				Compactin	1.050	1.210	1.180	1.170	1.270	1.030	1.350
				KLA/Compactin	1.140	1.190	1.460	1.260	1.470	1.350	1.590

Csnk1d	KLA Compactin Compactin+KLA	NM_139059		casein kinase 1, delta (Csnk1d), transcript variant 1, mRNA [NM_139059]	KLA	1.060	1.180	1.300	1.120	1.460	1.520	1.910
					Compactin	0.950	1.080	1.070	1.110	1.130	1.130	1.150
					KLA/Compactin	1.050	1.180	1.350	1.180	1.380	1.530	1.850

Csnk1e	KLA Compactin Compactin+KLA	NM_013767	casein kinase 1, epsilon (Csnk1e), mRNA [NM_013767]	KLA	0.880	1.030	0.980	1.010	1.020	0.940	1.000
				Compactin	0.990	0.990	1.020	0.980	0.960	0.980	1.070
				KLA/Compactin	0.950	1.100	1.010	1.040	1.040	0.960	1.020

Csnk1e	KLA Compactin Compactin+KLA	NM_013767		casein kinase 1, epsilon (Csnk1e), mRNA [NM_013767]	KLA	1.030	1.000	1.030	0.930	1.060	1.210	1.220
					Compactin	0.980	1.030	1.140	1.000	1.120	1.100	1.030
					KLA/Compactin	1.060	1.090	1.040	0.970	1.220	1.470	1.060

Csnk1g1	KLA Compactin Compactin+KLA	NM_173185	casein kinase 1, gamma 1 (Csnk1g1), mRNA [NM_173185]	KLA	0.960	1.030	1.020	0.990	0.640	1.260	1.310
				Compactin	0.910	1.060	1.010	0.990	0.930	1.040	1.010
				KLA/Compactin	1.030	0.980	0.930	1.010	1.060	1.220	1.240

Csnk1g1	KLA Compactin Compactin+KLA	NM_173185		casein kinase 1, gamma 1 (Csnk1g1), mRNA [NM_173185]	KLA	0.970	0.940	1.020	0.950	1.090	1.190	1.300
					Compactin	1.010	1.010	1.190	0.960	1.130	0.990	1.010
					KLA/Compactin	1.030	0.940	1.060	0.980	1.060	1.210	1.380

Csnk1g1	KLA Compactin Compactin+KLA	NM_173185	casein kinase 1, gamma 1 (Csnk1g1), mRNA [NM_173185]	KLA	1.090	1.040	1.160	0.920	1.200	1.170	1.290
				Compactin	1.010	0.990	0.970	0.970	1.010	0.990	1.100
				KLA/Compactin	1.060	0.990	1.130	1.000	1.100	1.330	1.340

Csnk1g1	KLA Compactin Compactin+KLA	NM_173185		casein kinase 1, gamma 1 (Csnk1g1), mRNA [NM_173185]	KLA	1.090	1.060	1.140	1.370	1.660	1.880	1.710
					Compactin	1.090	1.110	1.000	1.150	1.010	1.050	1.280
					KLA/Compactin	1.090	1.050	1.140	1.500	1.990	1.950	1.690

Csnk1g2	KLA Compactin Compactin+KLA	NM_134002	casein kinase 1, gamma 2 (Csnk1g2), mRNA [NM_134002]	KLA	0.920	0.740	0.760	0.760	0.620	0.670	0.680
				Compactin	1.000	0.780	0.900	0.900	1.100	1.100	0.920
				KLA/Compactin	0.800	0.990	0.900	0.580	0.810	0.970	0.840

Csnk1g2	KLA Compactin Compactin+KLA	NM_134002		casein kinase 1, gamma 2 (Csnk1g2), mRNA [NM_134002]	KLA	1.210	1.150	1.160	0.900	0.950	0.860	0.780
					Compactin	1.310	1.050	1.150	1.240	1.130	1.120	1.030
					KLA/Compactin	1.180	1.070	1.180	0.980	1.000	0.910	0.820

Csnk1g3	KLA Compactin Compactin+KLA	NM_152809	casein kinase 1, gamma 3 (Csnk1g3), mRNA [NM_152809]	KLA	1.060	1.070	1.140	1.120	1.270	1.370	1.760
				Compactin	1.000	1.090	1.040	1.140	0.950	0.990	1.060
				KLA/Compactin	1.100	1.000	1.210	1.340	1.380	1.510	1.710

Csnk1g3	KLA Compactin Compactin+KLA	NM_152809		casein kinase 1, gamma 3 (Csnk1g3), mRNA [NM_152809]	KLA	1.290	1.150	1.370	1.290	1.220	1.250	1.230
					Compactin	1.120	1.100	1.140	1.230	1.230	1.000	1.390
					KLA/Compactin	1.140	1.110	1.370	1.340	1.160	1.190	0.980

Dhh	KLA Compactin Compactin+KLA	NM_007857	desert hedgehog (Dhh), mRNA [NM_007857]	KLA	1.030	0.990	1.010	1.050	1.000	1.000	0.940
				Compactin	0.980	1.020	1.040	0.990	0.890	0.970	1.010
				KLA/Compactin	1.030	0.970	0.990	1.060	1.060	1.020	0.940

Fbxw11	KLA Compactin Compactin+KLA	AK010033		adult male tongue cDNA, RIKEN full-length enriched library, clone:2310065A07 product:unclassifiable, full insert sequence. [AK010033]	KLA	1.000	1.260	0.960	0.970	1.070	1.170	0.920
					Compactin	1.000	0.910	0.980	0.910	1.030	1.070	1.020
					KLA/Compactin	0.970	1.120	0.990	1.020	1.040	1.060	0.940

Fbxw11	KLA Compactin Compactin+KLA	NM_134015	F-box and WD-40 domain protein 11 (Fbxw11), mRNA [NM_134015]	KLA	0.940	1.010	1.250	1.260	1.290	1.370	1.350
				Compactin	0.960	0.980	0.980	0.770	1.250	1.110	1.230
				KLA/Compactin	0.810	1.020	1.170	1.010	1.520	2.340	1.800

Gas1	KLA Compactin Compactin+KLA	NM_008086		growth arrest specific 1 (Gas1), mRNA [NM_008086]	KLA	0.980	1.070	0.970	0.880	0.980	1.130	1.030
					Compactin	0.920	1.020	0.940	1.060	0.980	0.940	1.040
					KLA/Compactin	0.970	0.880	0.930	1.100	1.070	0.890	1.060

Gli1	KLA Compactin Compactin+KLA	NM_010296	GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	0.940	0.990	0.950	1.030	0.930	0.950	1.290
				Compactin	1.030	0.980	0.980	0.920	1.040	0.970	1.020
				KLA/Compactin	0.970	1.030	0.960	0.940	1.060	0.970	0.970

Gli1	KLA Compactin Compactin+KLA	NM_010296		GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	0.960	0.980	0.940	1.000	0.930	1.000	1.010
					Compactin	0.980	0.980	1.020	1.000	0.960	1.020	0.960
					KLA/Compactin	1.040	0.940	1.000	0.920	0.920	0.840	0.980

Gli1	KLA Compactin Compactin+KLA	NM_010296	GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	0.970	0.970	0.940	1.000	0.990	0.990	0.940
				Compactin	1.020	0.970	1.000	1.030	0.960	1.120	0.950
				KLA/Compactin	0.980	0.990	1.010	1.030	0.970	0.980	0.980

Gli1	KLA Compactin Compactin+KLA	NM_010296		GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.000	0.940	1.000	1.050	0.980	0.990	0.950
					Compactin	0.990	0.960	0.980	0.990	0.970	1.010	0.930
					KLA/Compactin	1.030	1.090	0.990	1.020	0.980	0.970	0.870

Gli1	KLA Compactin Compactin+KLA	NM_010296	GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.010	0.970	0.880	0.980	0.990	1.110	1.020
				Compactin	0.970	0.850	1.010	1.060	1.020	1.050	0.960
				KLA/Compactin	0.950	0.960	0.950	1.260	0.940	0.920	0.970

Gli1	KLA Compactin Compactin+KLA	NM_010296		GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.020	0.980	0.980	1.030	0.990	0.900	0.950
					Compactin	0.940	0.960	1.060	0.960	1.020	1.070	1.010
					KLA/Compactin	0.960	1.020	1.010	0.970	0.890	0.870	0.950

Gli1	KLA Compactin Compactin+KLA	NM_010296	GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.020	0.980	1.000	1.030	0.940	0.970	0.960
				Compactin	1.070	0.970	0.960	1.050	1.050	1.030	0.950
				KLA/Compactin	0.930	0.930	0.990	0.930	0.950	0.980	1.020

Gli1	KLA Compactin Compactin+KLA	NM_010296		GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.030	1.000	0.960	0.990	1.000	0.930	1.020
					Compactin	1.170	0.970	1.060	1.010	1.020	1.080	0.960
					KLA/Compactin	0.970	1.010	1.080	0.990	0.910	0.930	1.000

Gli1	KLA Compactin Compactin+KLA	NM_010296	GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.040	0.910	0.990	1.030	1.000	0.980	1.050
				Compactin	0.960	0.980	0.980	1.010	1.070	0.960	0.990
				KLA/Compactin	1.080	1.060	0.990	0.940	0.960	1.000	0.940

Gli1	KLA Compactin Compactin+KLA	NM_010296		GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.040	0.970	0.970	1.000	1.000	0.950	0.940
					Compactin	0.950	1.040	1.010	0.990	0.960	1.070	1.030
					KLA/Compactin	1.010	0.990	1.000	0.930	0.920	0.860	0.980

Gli1	KLA Compactin Compactin+KLA	NM_010296	GLI-Kruppel family member GLI1 (Gli1), mRNA [NM_010296]	KLA	1.080	1.010	0.960	1.010	0.950	1.010	0.950
				Compactin	1.000	1.030	0.960	1.000	1.010	1.110	1.000
				KLA/Compactin	1.120	1.040	1.000	1.020	0.990	0.990	0.990

Gli2	KLA Compactin Compactin+KLA	NM_001081125		GLI-Kruppel family member GLI2 (Gli2), mRNA [NM_001081125]	KLA	0.940	1.020	1.020	1.150	0.980	0.990	1.000
					Compactin	1.060	1.010	1.000	0.940	0.950	1.070	0.930
					KLA/Compactin	1.000	1.000	0.980	1.060	1.100	1.050	1.030

Gli2	KLA Compactin Compactin+KLA	NM_001081125	GLI-Kruppel family member GLI2 (Gli2), mRNA [NM_001081125]	KLA	1.000	1.040	0.970	1.000	1.050	1.030	1.050
				Compactin	0.900	1.010	0.970	1.000	1.050	1.030	1.020
				KLA/Compactin	0.960	0.990	0.950	1.050	1.000	0.960	1.020

Gli2	KLA Compactin Compactin+KLA	NM_001081125		GLI-Kruppel family member GLI2 (Gli2), mRNA [NM_001081125]	KLA	1.030	1.020	1.010	0.980	0.980	0.940	1.030
					Compactin	0.980	1.050	1.070	0.950	1.000	0.960	0.910
					KLA/Compactin	1.010	1.020	0.890	1.170	1.070	0.970	1.000

Gli3	KLA Compactin Compactin+KLA	NM_008130	GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	0.960	1.040	0.980	0.940	0.990	1.070	1.060
				Compactin	0.870	1.040	1.030	0.960	0.920	1.040	1.030
				KLA/Compactin	0.980	0.910	1.050	1.100	1.010	0.940	1.070

Gli3	KLA Compactin Compactin+KLA	NM_008130		GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	0.960	1.040	1.000	1.010	1.050	0.980	0.990
					Compactin	0.980	0.990	1.010	1.010	0.970	0.990	1.040
					KLA/Compactin	0.990	1.020	0.940	1.000	0.990	1.000	1.010

Gli3	KLA Compactin Compactin+KLA	NM_008130	GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	0.980	0.920	1.010	0.970	1.000	1.040	1.040
				Compactin	1.010	1.010	1.030	1.070	1.020	1.000	1.000
				KLA/Compactin	1.040	1.060	0.990	0.970	1.000	1.010	0.980

Gli3	KLA Compactin Compactin+KLA	NM_008130		GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	0.980	1.090	1.010	0.980	0.980	1.020	1.010
					Compactin	0.940	1.020	0.990	0.960	0.970	1.020	1.000
					KLA/Compactin	0.930	0.860	1.050	1.020	0.980	0.930	0.990

Gli3	KLA Compactin Compactin+KLA	NM_008130	GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	0.990	0.980	0.990	0.990	1.000	1.010	0.960
				Compactin	1.100	0.980	0.990	1.070	0.990	0.980	0.930
				KLA/Compactin	1.020	0.940	1.010	1.060	0.950	1.020	1.000

Gli3	KLA Compactin Compactin+KLA	NM_008130		GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	1.000	0.990	0.960	0.950	0.960	1.020	1.010
					Compactin	0.940	0.940	0.980	0.980	1.000	1.020	1.080
					KLA/Compactin	1.000	0.970	1.040	1.010	1.030	0.980	1.050

Gli3	KLA Compactin Compactin+KLA	NM_008130	GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	1.010	0.970	1.010	1.020	1.020	1.000	0.970
				Compactin	0.940	1.020	0.970	1.020	1.000	0.940	1.030
				KLA/Compactin	1.010	0.980	1.010	0.960	0.960	1.010	1.020

Gli3	KLA Compactin Compactin+KLA	NM_008130		GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	1.010	0.980	1.010	1.000	1.050	1.080	1.010
					Compactin	1.020	1.000	0.990	0.970	0.980	1.010	0.960
					KLA/Compactin	0.990	1.000	1.030	0.960	1.040	0.980	0.990

Gli3	KLA Compactin Compactin+KLA	NM_008130	GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	1.010	1.030	1.040	0.990	1.080	0.960	1.010
				Compactin	0.980	0.990	0.960	0.970	1.030	1.000	0.950
				KLA/Compactin	0.980	0.970	1.020	1.040	1.040	0.950	1.060

Gli3	KLA Compactin Compactin+KLA	NM_008130		GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	1.010	1.040	1.020	1.010	1.020	0.980	0.990
					Compactin	0.990	1.010	1.040	0.970	1.000	0.940	1.020
					KLA/Compactin	1.040	1.020	0.970	0.930	0.980	0.960	0.970

Gli3	KLA Compactin Compactin+KLA	NM_008130	GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	1.020	0.970	1.000	0.990	0.950	0.990	1.010
				Compactin	0.990	1.050	1.000	0.960	0.970	1.050	1.000
				KLA/Compactin	0.980	1.040	1.010	1.060	0.930	1.080	1.060

Gli3	KLA Compactin Compactin+KLA	NM_008130		GLI-Kruppel family member GLI3 (Gli3), mRNA [NM_008130]	KLA	1.020	1.080	1.000	0.950	0.970	1.050	0.990
					Compactin	1.010	1.080	0.950	1.000	0.880	1.040	1.070
					KLA/Compactin	1.000	0.950	1.010	1.000	1.050	0.940	1.000

Gsk3b	KLA Compactin Compactin+KLA	NM_019827	glycogen synthase kinase 3 beta (Gsk3b), mRNA [NM_019827]	KLA	0.920	0.950	1.150	1.040	1.470	1.910	3.550
				Compactin	0.900	0.990	0.900	0.970	0.940	0.890	1.160
				KLA/Compactin	0.960	1.090	1.080	1.030	1.670	2.440	4.310

Gsk3b	KLA Compactin Compactin+KLA	NM_019827		glycogen synthase kinase 3 beta (Gsk3b), mRNA [NM_019827]	KLA	1.120	0.900	0.720	0.820	0.880	0.790	0.710
					Compactin	0.920	0.960	0.840	0.910	0.960	0.840	1.030
					KLA/Compactin	0.940	0.910	0.770	0.750	0.880	0.800	0.720

Hhip	KLA Compactin Compactin+KLA	NM_020259	Hedgehog-interacting protein (Hhip), mRNA [NM_020259]	KLA	0.980	1.010	1.030	1.060	1.010	0.940	1.070
				Compactin	1.040	0.920	0.980	1.000	1.000	0.990	1.010
				KLA/Compactin	1.040	1.050	1.070	0.990	1.000	1.080	1.010

Hhip	KLA Compactin Compactin+KLA	NM_020259		Hedgehog-interacting protein (Hhip), mRNA [NM_020259]	KLA	0.990	0.990	0.950	0.960	0.870	1.040	1.010
					Compactin	1.040	1.080	0.920	1.020	0.970	1.090	1.020
					KLA/Compactin	0.980	0.940	0.870	1.010	0.980	1.020	1.010

Ihh	KLA Compactin Compactin+KLA	AK090147	adult male intestinal mucosa cDNA, RIKEN full-length enriched library, clone:G630005N21 product:Indian hedgehog homolog, (Drosophila), full insert sequence. [AK090147]	KLA	1.060	0.980	0.970	1.000	1.000	0.960	1.000
				Compactin	1.020	0.980	1.010	1.070	1.080	0.980	1.060
				KLA/Compactin	1.020	0.990	1.010	1.040	1.020	1.040	1.030

Ihh	KLA Compactin Compactin+KLA	NM_010544		Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	0.920	0.950	1.030	0.980	1.020	1.000	1.010
					Compactin	0.980	0.940	1.000	1.000	0.950	1.040	0.940
					KLA/Compactin	0.930	1.050	0.980	0.960	0.980	0.990	1.040

Ihh	KLA Compactin Compactin+KLA	NM_010544	Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	0.960	0.990	0.960	0.980	0.970	1.000	1.070
				Compactin	1.000	0.990	0.960	0.960	1.070	1.000	1.020
				KLA/Compactin	1.050	1.030	0.990	1.050	0.970	0.990	0.990

Ihh	KLA Compactin Compactin+KLA	NM_010544		Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	0.960	1.060	0.980	0.990	1.010	0.950	1.040
					Compactin	1.060	0.990	1.120	1.040	1.100	1.050	1.000
					KLA/Compactin	0.970	0.970	0.950	0.990	0.940	1.020	0.960

Ihh	KLA Compactin Compactin+KLA	NM_010544	Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	0.970	1.040	1.000	1.060	1.020	0.990	1.000
				Compactin	0.980	1.010	1.010	0.990	1.010	1.040	1.030
				KLA/Compactin	0.980	0.990	1.010	1.020	0.940	0.960	1.000

Ihh	KLA Compactin Compactin+KLA	NM_010544		Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	0.980	1.050	1.040	1.000	1.010	0.990	0.970
					Compactin	0.950	1.030	0.980	1.030	1.080	1.000	1.030
					KLA/Compactin	0.940	1.090	1.030	0.970	1.040	1.010	0.970

Ihh	KLA Compactin Compactin+KLA	NM_010544	Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	0.990	0.990	1.010	0.990	0.990	0.970	0.990
				Compactin	0.960	0.920	1.030	0.970	0.970	0.970	1.000
				KLA/Compactin	1.010	1.080	0.980	0.930	0.960	1.000	1.010

Ihh	KLA Compactin Compactin+KLA	NM_010544		Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	1.010	0.970	0.940	0.960	0.990	0.930	1.020
					Compactin	0.980	0.900	1.030	0.980	1.020	1.040	0.970
					KLA/Compactin	0.920	1.010	1.030	0.980	1.030	1.020	1.000

Ihh	KLA Compactin Compactin+KLA	NM_010544	Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	1.010	0.980	0.960	1.090	0.990	1.110	0.950
				Compactin	0.930	0.950	1.000	1.070	0.950	1.000	1.040
				KLA/Compactin	0.970	1.010	0.920	1.040	0.980	0.950	1.030

Ihh	KLA Compactin Compactin+KLA	NM_010544		Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	1.010	1.000	0.980	1.030	1.020	1.020	0.940
					Compactin	1.050	0.970	1.070	1.030	1.090	0.970	1.050
					KLA/Compactin	0.970	1.000	1.000	0.970	0.990	0.980	1.010

Ihh	KLA Compactin Compactin+KLA	NM_010544	Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	1.030	0.970	1.040	0.990	0.970	1.010	1.060
				Compactin	1.040	0.960	1.040	1.010	1.020	1.000	0.930
				KLA/Compactin	1.050	1.020	0.970	1.040	0.930	0.950	0.980

Ihh	KLA Compactin Compactin+KLA	NM_010544		Indian hedgehog (Ihh), mRNA [NM_010544]	KLA	1.060	0.930	0.970	0.950	0.920	0.970	0.980
					Compactin	0.920	1.060	1.030	1.010	1.110	0.950	1.100
					KLA/Compactin	0.960	1.090	1.000	0.980	1.000	1.050	1.000

Lrp2	KLA Compactin Compactin+KLA	NM_001081088	low density lipoprotein receptor-related protein 2 (Lrp2), mRNA [NM_001081088]	KLA	0.930	0.960	1.010	1.050	1.030	0.990	1.070
				Compactin	1.010	0.970	0.970	0.950	1.100	0.930	1.010
				KLA/Compactin	1.030	0.970	1.030	1.010	0.930	1.010	1.030

Lrp2	KLA Compactin Compactin+KLA	NM_001081088		low density lipoprotein receptor-related protein 2 (Lrp2), mRNA [NM_001081088]	KLA	0.970	0.930	0.980	1.020	1.030	0.970	1.010
					Compactin	1.000	1.000	1.010	0.980	1.060	1.020	0.960
					KLA/Compactin	1.040	1.000	1.030	1.010	0.970	1.000	0.930

Lrp2	KLA Compactin Compactin+KLA	NM_001081088	low density lipoprotein receptor-related protein 2 (Lrp2), mRNA [NM_001081088]	KLA	1.020	1.050	0.980	1.000	0.990	0.980	0.970
				Compactin	0.990	1.060	1.010	1.020	1.020	1.030	0.930
				KLA/Compactin	0.950	1.010	1.010	1.010	0.960	1.130	1.010

Lrp2	KLA Compactin Compactin+KLA	NM_001081088		low density lipoprotein receptor-related protein 2 (Lrp2), mRNA [NM_001081088]	KLA	1.040	0.970	1.030	1.050	0.950	0.980	0.940
					Compactin	1.030	0.980	1.000	0.950	0.990	0.930	1.010
					KLA/Compactin	1.070	0.960	0.990	0.980	0.920	0.910	0.900

Prkaca	KLA Compactin Compactin+KLA	NM_008854	protein kinase, cAMP dependent, catalytic, alpha (Prkaca), mRNA [NM_008854]	KLA	1.270	1.130	1.040	0.960	0.750	0.990	1.580
				Compactin	1.020	1.250	1.120	1.070	0.970	0.920	0.810
				KLA/Compactin	1.110	0.870	1.020	1.080	0.820	0.890	2.230

Prkacb	KLA Compactin Compactin+KLA	NM_011100		protein kinase, cAMP dependent, catalytic, beta (Prkacb), mRNA [NM_011100]	KLA	0.950	0.960	1.180	0.990	0.980	0.990	1.130
					Compactin	1.090	1.000	1.020	1.010	0.900	0.950	0.860
					KLA/Compactin	1.060	1.000	1.100	1.060	0.990	1.030	1.130

Prkacb	KLA Compactin Compactin+KLA	NM_011100	protein kinase, cAMP dependent, catalytic, beta (Prkacb), mRNA [NM_011100]	KLA	1.060	0.980	1.060	1.020	0.910	0.880	0.840
				Compactin	1.080	1.060	1.120	1.160	0.910	0.880	0.940
				KLA/Compactin	1.050	0.960	1.040	1.070	0.880	0.830	0.930

Prkx	KLA Compactin Compactin+KLA	NM_016979		protein kinase, X-linked (Prkx), mRNA [NM_016979]	KLA	1.070	1.370	1.460	2.530	4.040	3.310	2.680
					Compactin	1.060	1.020	1.040	1.100	1.290	1.520	1.700
					KLA/Compactin	1.140	1.150	1.400	2.380	4.880	4.380	2.510

Ptch1	KLA Compactin Compactin+KLA	AK147626	cDNA, RIKEN full-length enriched library, clone:M5C1096C04 product:patched homolog 1, full insert sequence [AK147626]	KLA	1.000	1.000	1.030	1.420	1.330	1.010	1.110
				Compactin	0.960	0.960	1.030	0.940	0.960	1.050	0.880
				KLA/Compactin	0.930	0.930	1.150	1.320	1.050	1.210	1.220

Ptch1	KLA Compactin Compactin+KLA	NM_008957		patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.930	1.000	0.990	1.120	1.200	1.210	1.330
					Compactin	0.930	1.090	1.080	1.040	0.880	1.060	1.100
					KLA/Compactin	0.990	0.900	1.080	1.210	1.180	1.140	1.220

Ptch1	KLA Compactin Compactin+KLA	NM_008957	patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.930	1.030	1.030	1.200	1.140	1.150	1.270
				Compactin	1.000	1.030	0.990	0.980	1.000	1.040	0.940
				KLA/Compactin	1.050	1.030	1.040	1.140	1.080	1.290	1.300

Ptch1	KLA Compactin Compactin+KLA	NM_008957		patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.960	1.030	1.010	1.100	1.160	1.260	1.260
					Compactin	0.960	1.020	1.040	1.020	0.920	1.000	1.050
					KLA/Compactin	0.980	0.960	1.050	1.220	1.130	1.250	1.290

Ptch1	KLA Compactin Compactin+KLA	NM_008957	patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.970	0.980	1.060	1.150	1.230	1.170	1.200
				Compactin	1.140	1.060	0.960	1.020	1.000	0.970	1.030
				KLA/Compactin	0.970	0.990	1.030	1.170	1.130	1.300	1.190

Ptch1	KLA Compactin Compactin+KLA	NM_008957		patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.980	0.990	1.220	1.170	1.200	1.090	1.250
					Compactin	1.030	1.020	1.000	1.060	1.060	0.980	1.270
					KLA/Compactin	1.010	0.950	1.030	1.100	1.220	1.240	1.320

Ptch1	KLA Compactin Compactin+KLA	NM_008957	patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.980	1.010	1.150	1.120	1.200	1.240	1.280
				Compactin	0.980	1.080	0.990	1.020	0.930	1.030	1.030
				KLA/Compactin	1.010	0.980	1.070	1.140	1.130	1.160	1.270

Ptch1	KLA Compactin Compactin+KLA	NM_008957		patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.980	1.030	0.990	1.070	1.160	1.250	1.230
					Compactin	0.900	1.010	1.050	1.000	0.960	1.020	0.990
					KLA/Compactin	0.960	0.980	1.070	1.180	1.110	1.230	1.330

Ptch1	KLA Compactin Compactin+KLA	NM_008957	patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	0.990	0.970	1.180	1.120	1.170	1.180	1.400
				Compactin	0.920	1.050	0.930	0.950	1.010	0.990	0.990
				KLA/Compactin	1.110	0.980	1.050	1.130	1.160	1.220	1.250

Ptch1	KLA Compactin Compactin+KLA	NM_008957		patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	1.020	1.030	1.070	1.180	1.330	1.200	1.260
					Compactin	0.980	1.030	1.010	1.110	1.010	1.040	1.000
					KLA/Compactin	1.060	1.020	1.070	1.220	1.270	1.180	1.290

Ptch1	KLA Compactin Compactin+KLA	NM_008957	patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	1.030	1.010	1.060	1.100	1.080	1.180	1.210
				Compactin	0.950	1.060	0.980	1.020	0.890	0.980	1.060
				KLA/Compactin	1.080	0.970	1.090	1.170	1.150	1.190	1.290

Ptch1	KLA Compactin Compactin+KLA	NM_008957		patched homolog 1 (Ptch1), mRNA [NM_008957]	KLA	1.090	0.990	1.130	1.100	1.250	0.870	1.150
					Compactin	1.040	1.040	1.030	1.050	1.030	1.040	1.000
					KLA/Compactin	1.040	1.040	1.070	1.180	1.120	1.270	1.400

Ptch2	KLA Compactin Compactin+KLA	BC058397	patched homolog 2, mRNA (cDNA clone IMAGE:6832070), partial cds [BC058397]	KLA	0.990	0.980	1.020	1.060	1.060	0.940	1.020
				Compactin	0.940	0.980	0.940	0.950	1.010	1.050	0.990
				KLA/Compactin	0.980	0.940	0.970	1.000	0.980	1.010	1.020

Ptch2	KLA Compactin Compactin+KLA	NM_008958		patched homolog 2 (Ptch2), mRNA [NM_008958]	KLA	1.090	1.090	1.110	1.230	1.170	1.160	1.020
					Compactin	1.030	1.050	1.000	1.030	1.070	1.010	1.030
					KLA/Compactin	1.100	1.080	1.040	1.180	1.110	1.030	1.020

Rab23	KLA Compactin Compactin+KLA	AK164057	7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430038D19 product:RAB23, member RAS oncogene family, full insert sequence [AK164057]	KLA	1.010	0.840	0.900	0.790	0.770	0.690	0.570
				Compactin	1.120	1.020	1.040	1.070	1.040	0.960	0.970
				KLA/Compactin	1.080	0.820	0.790	0.860	0.770	0.610	0.610

Rab23	KLA Compactin Compactin+KLA	NM_008999		RAB23, member RAS oncogene family (Rab23), mRNA [NM_008999]	KLA	1.070	0.910	0.880	0.810	0.930	0.940	0.810
					Compactin	1.100	1.010	1.140	1.090	0.940	1.060	1.040
					KLA/Compactin	1.100	0.990	0.900	0.900	0.950	0.950	0.820

Rab23	KLA Compactin Compactin+KLA	NM_008999	RAB23, member RAS oncogene family (Rab23), mRNA [NM_008999]	KLA	1.140	0.880	0.930	0.760	0.960	1.010	0.780
				Compactin	1.050	1.080	1.130	1.050	1.040	1.070	1.180
				KLA/Compactin	1.110	1.120	0.850	0.780	0.940	0.970	0.680

Shh	KLA Compactin Compactin+KLA	NM_009170		sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.910	1.040	0.940	1.040	1.000	0.940	1.030
					Compactin	0.930	0.980	0.970	1.000	0.980	1.040	0.990
					KLA/Compactin	1.000	1.050	1.050	1.010	0.980	1.010	1.010

Shh	KLA Compactin Compactin+KLA	NM_009170	sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.950	0.960	1.000	0.970	0.950	1.030	0.960
				Compactin	0.980	1.100	0.940	1.000	0.980	0.960	1.000
				KLA/Compactin	1.010	0.980	1.000	0.920	0.960	0.970	1.010

Shh	KLA Compactin Compactin+KLA	NM_009170		sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.960	0.920	1.000	1.020	1.010	1.050	1.000
					Compactin	0.970	1.020	1.080	0.970	1.100	0.970	1.030
					KLA/Compactin	1.080	1.130	1.030	0.970	1.010	1.050	0.990

Shh	KLA Compactin Compactin+KLA	NM_009170	sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.960	0.970	0.980	0.970	0.970	0.990	1.000
				Compactin	0.920	0.980	0.980	1.130	0.960	1.010	1.030
				KLA/Compactin	1.000	1.070	0.970	1.000	1.110	1.010	1.040

Shh	KLA Compactin Compactin+KLA	NM_009170		sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.960	0.980	1.030	0.980	1.060	1.060	0.990
					Compactin	0.950	0.950	1.040	0.960	1.020	1.040	1.080
					KLA/Compactin	1.010	0.950	1.040	0.950	0.970	1.020	1.070

Shh	KLA Compactin Compactin+KLA	NM_009170	sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.960	0.990	0.980	0.940	0.990	1.010	1.010
				Compactin	0.970	1.020	1.020	1.010	1.040	0.970	0.940
				KLA/Compactin	1.040	0.970	0.970	1.030	0.980	1.090	0.990

Shh	KLA Compactin Compactin+KLA	NM_009170		sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.960	1.030	1.000	1.040	0.980	1.010	1.030
					Compactin	0.990	0.930	1.000	1.060	1.030	1.010	1.040
					KLA/Compactin	1.040	1.060	1.060	0.970	1.080	1.000	1.010

Shh	KLA Compactin Compactin+KLA	NM_009170	sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.970	1.020	1.040	1.020	1.000	1.030	1.050
				Compactin	1.190	0.950	1.050	1.000	1.030	0.980	1.000
				KLA/Compactin	0.990	1.110	0.960	0.950	0.960	0.970	1.010

Shh	KLA Compactin Compactin+KLA	NM_009170		sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.970	1.050	1.000	1.000	0.990	1.030	1.080
					Compactin	0.920	1.000	1.030	0.960	0.990	1.040	1.000
					KLA/Compactin	1.000	0.980	0.980	0.970	0.990	0.910	0.990

Shh	KLA Compactin Compactin+KLA	NM_009170	sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.980	1.020	0.930	1.010	1.000	1.020	0.950
				Compactin	1.060	1.040	0.960	1.010	1.000	0.930	1.050
				KLA/Compactin	1.000	1.020	1.000	1.000	1.020	1.010	0.990

Shh	KLA Compactin Compactin+KLA	NM_009170		sonic hedgehog (Shh), mRNA [NM_009170]	KLA	0.990	1.060	0.960	0.920	0.970	1.100	0.990
					Compactin	0.860	0.990	1.030	0.970	0.900	1.010	1.050
					KLA/Compactin	0.950	0.960	1.050	0.990	0.920	0.900	0.980

Smo	KLA Compactin Compactin+KLA	171543834	smoothened homolog (Drosophila)	KLA	1.000	1.080	0.980	1.040	0.990	0.950	0.990
				Compactin	1.010	1.090	1.100	1.000	1.050	0.980	1.070
				KLA/Compactin	1.030	1.030	1.070	0.980	0.920	0.920	0.990

Smo	KLA Compactin Compactin+KLA	NM_176996		smoothened homolog (Drosophila) (Smo), mRNA [NM_176996]	KLA	1.010	1.040	1.060	1.280	0.900	0.920	0.980
					Compactin	1.090	1.080	1.110	1.070	0.970	0.960	1.060
					KLA/Compactin	1.040	1.050	1.020	1.010	0.910	0.950	0.900

Stk36	KLA Compactin Compactin+KLA	NM_175031	serine/threonine kinase 36 (fused homolog, Drosophila) (Stk36), mRNA [NM_175031]	KLA	0.980	1.000	0.950	1.050	1.010	0.970	0.940
				Compactin	0.990	1.010	1.090	1.040	0.950	1.010	1.040
				KLA/Compactin	1.000	1.050	0.950	1.000	1.020	1.090	1.050

Stk36	KLA Compactin Compactin+KLA	NM_175031		serine/threonine kinase 36 (fused homolog, Drosophila) (Stk36), mRNA [NM_175031]	KLA	1.020	0.880	0.950	0.980	1.030	1.050	1.090
					Compactin	0.930	0.970	1.030	1.000	1.070	0.980	0.950
					KLA/Compactin	0.980	0.980	1.000	1.000	0.940	1.050	1.040

Stk36	KLA Compactin Compactin+KLA	NM_175031	serine/threonine kinase 36 (fused homolog, Drosophila) (Stk36), mRNA [NM_175031]	KLA	1.080	1.140	1.060	1.110	1.070	1.190	1.430
				Compactin	1.080	1.090	1.020	1.060	1.110	1.080	1.110
				KLA/Compactin	1.040	1.040	1.070	1.090	1.160	1.260	1.390

Sufu	KLA Compactin Compactin+KLA	BC048168		suppressor of fused homolog (Drosophila), mRNA (cDNA clone MGC:61295 IMAGE:6821477), complete cds [BC048168]	KLA	0.920	0.950	0.870	1.030	0.820	0.700	0.750
					Compactin	0.970	1.060	1.070	0.880	0.990	0.950	0.960
					KLA/Compactin	0.920	1.050	0.860	0.970	0.810	0.710	0.710

Sufu	KLA Compactin Compactin+KLA	NM_015752	suppressor of fused homolog (Drosophila) (Sufu), transcript variant 1, mRNA [NM_015752]	KLA	1.000	1.090	1.010	1.070	1.100	1.060	1.150
				Compactin	0.970	1.040	1.020	1.010	0.990	1.100	0.970
				KLA/Compactin	0.930	1.090	1.020	1.100	0.930	1.140	1.290

Sufu	KLA Compactin Compactin+KLA	NM_015752		suppressor of fused homolog (Drosophila) (Sufu), transcript variant 1, mRNA [NM_015752]	KLA	1.020	0.980	1.060	1.090	1.050	1.050	1.200
					Compactin	0.970	0.940	1.040	0.970	0.940	1.000	0.970
					KLA/Compactin	0.990	0.990	1.160	1.080	1.040	1.070	1.120

Wnt1	KLA Compactin Compactin+KLA	NM_021279	wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	0.990	0.930	0.910	1.020	0.980	1.030	1.010
				Compactin	0.990	0.930	0.980	1.020	0.970	0.930	1.050
				KLA/Compactin	0.990	0.990	0.990	1.040	1.030	0.950	1.020

Wnt1	KLA Compactin Compactin+KLA	NM_021279		wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	0.990	0.970	0.950	1.040	1.020	0.990	1.060
					Compactin	1.050	1.020	1.040	0.980	1.090	1.020	0.990
					KLA/Compactin	1.020	0.990	1.010	1.080	1.050	1.140	1.080

Wnt1	KLA Compactin Compactin+KLA	NM_021279	wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.010	0.980	0.960	1.060	1.070	1.060	1.100
				Compactin	1.060	1.040	1.010	0.940	1.110	1.060	0.870
				KLA/Compactin	0.960	0.960	1.070	0.990	1.050	1.140	1.120

Wnt1	KLA Compactin Compactin+KLA	NM_021279		wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.020	1.000	1.040	1.100	1.010	0.970	1.070
					Compactin	1.020	0.980	0.960	1.000	1.060	1.060	0.960
					KLA/Compactin	1.020	1.000	1.000	1.000	1.050	1.040	1.040

Wnt1	KLA Compactin Compactin+KLA	NM_021279	wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.030	0.970	1.010	1.060	0.950	1.000	1.070
				Compactin	0.960	1.000	0.970	1.000	1.020	1.030	0.960
				KLA/Compactin	1.010	0.950	0.990	1.100	0.970	1.110	0.980

Wnt1	KLA Compactin Compactin+KLA	NM_021279		wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.030	0.990	1.090	1.000	0.970	1.080	1.010
					Compactin	1.150	1.000	1.010	1.050	1.050	1.020	1.010
					KLA/Compactin	0.980	1.060	1.020	0.990	1.060	0.940	1.080

Wnt1	KLA Compactin Compactin+KLA	NM_021279	wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.040	0.930	1.020	1.020	0.990	1.050	1.020
				Compactin	1.100	1.030	1.020	0.960	1.090	1.050	1.010
				KLA/Compactin	1.040	1.060	0.960	0.970	1.060	1.060	0.990

Wnt1	KLA Compactin Compactin+KLA	NM_021279		wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.040	0.970	0.950	0.990	1.030	1.140	1.060
					Compactin	1.010	1.020	1.060	1.080	0.970	1.020	0.940
					KLA/Compactin	1.010	0.990	1.030	0.970	1.040	0.970	1.050

Wnt1	KLA Compactin Compactin+KLA	NM_021279	wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.050	1.040	1.010	1.020	1.100	1.090	1.070
				Compactin	1.080	0.910	1.050	1.050	1.110	0.960	0.940
				KLA/Compactin	0.990	0.990	1.020	1.010	0.980	0.980	1.100

Wnt1	KLA Compactin Compactin+KLA	NM_021279		wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.110	1.010	1.050	1.050	1.060	0.990	1.090
					Compactin	0.950	0.980	0.980	1.020	1.090	1.150	1.090
					KLA/Compactin	1.000	1.060	1.030	1.040	1.000	1.130	1.030

Wnt1	KLA Compactin Compactin+KLA	NM_021279	wingless-related MMTV integration site 1 (Wnt1), mRNA [NM_021279]	KLA	1.130	0.870	1.020	1.070	1.030	1.020	1.060
				Compactin	1.010	1.000	1.050	1.030	1.060	1.070	0.850
				KLA/Compactin	1.070	1.110	1.020	0.970	0.970	1.030	1.080

Wnt10a	KLA Compactin Compactin+KLA	NM_009518		wingless related MMTV integration site 10a (Wnt10a), mRNA [NM_009518]	KLA	1.070	1.000	1.500	1.330	1.200	1.180	1.020
					Compactin	0.980	1.010	0.950	0.910	0.990	0.990	0.970
					KLA/Compactin	0.990	1.030	1.510	1.450	1.130	1.210	1.070

Wnt10b	KLA Compactin Compactin+KLA	NM_011718	wingless related MMTV integration site 10b (Wnt10b), mRNA [NM_011718]	KLA	1.090	0.990	0.990	1.040	0.990	1.070	0.940
				Compactin	0.950	1.000	1.000	1.000	0.940	0.970	1.110
				KLA/Compactin	0.960	0.920	1.010	1.030	0.980	1.000	0.980

Wnt11	KLA Compactin Compactin+KLA	NM_009519		wingless-related MMTV integration site 11 (Wnt11), mRNA [NM_009519]	KLA	0.980	0.950	0.950	1.010	0.980	1.030	1.000
					Compactin	1.000	0.990	1.010	0.980	1.000	0.960	0.920
					KLA/Compactin	1.000	0.930	0.990	0.970	1.020	0.920	1.030

Wnt16	KLA Compactin Compactin+KLA	NM_053116	wingless-related MMTV integration site 16 (Wnt16), mRNA [NM_053116]	KLA	1.060	0.980	1.050	0.950	0.980	0.950	1.030
				Compactin	1.060	0.990	0.990	1.010	1.060	0.980	1.030
				KLA/Compactin	1.030	1.070	1.030	1.020	1.010	0.950	1.050

Wnt2	KLA Compactin Compactin+KLA	NM_023653		wingless-related MMTV integration site 2 (Wnt2), mRNA [NM_023653]	KLA	0.960	0.980	0.970	1.070	0.960	1.000	1.020
					Compactin	1.000	0.990	1.090	1.030	1.000	0.990	0.980
					KLA/Compactin	1.010	0.990	0.920	1.000	1.000	0.970	1.000

Wnt2b	KLA Compactin Compactin+KLA	NM_009520	wingless related MMTV integration site 2b (Wnt2b), mRNA [NM_009520]	KLA	1.020	0.990	0.970	1.030	0.990	1.030	0.990
				Compactin	1.040	0.930	1.060	1.080	1.020	1.030	0.990
				KLA/Compactin	0.960	0.980	1.080	1.000	0.980	1.020	1.020

Wnt3	KLA Compactin Compactin+KLA	NM_009521		wingless-related MMTV integration site 3 (Wnt3), mRNA [NM_009521]	KLA	1.010	1.080	1.000	0.910	0.980	1.000	0.950
					Compactin	0.910	1.000	0.980	0.950	0.930	1.000	1.130
					KLA/Compactin	0.970	0.960	0.980	1.050	0.990	0.960	1.030

Wnt3	KLA Compactin Compactin+KLA	NM_009521	wingless-related MMTV integration site 3 (Wnt3), mRNA [NM_009521]	KLA	1.090	1.000	1.010	0.990	0.990	0.920	1.020
				Compactin	1.020	0.950	0.950	1.030	0.990	0.950	0.950
				KLA/Compactin	1.020	1.000	1.040	1.020	1.030	1.060	1.020

Wnt3a	KLA Compactin Compactin+KLA	NM_009522		wingless-related MMTV integration site 3A (Wnt3a), mRNA [NM_009522]	KLA	0.970	0.910	1.030	1.000	1.000	1.020	1.010
					Compactin	1.010	0.940	1.000	1.030	1.050	0.990	0.930
					KLA/Compactin	0.970	1.010	0.960	0.940	1.000	1.020	1.030

Wnt4	KLA Compactin Compactin+KLA	NM_009523	wingless-related MMTV integration site 4 (Wnt4), mRNA [NM_009523]	KLA	0.960	0.930	1.040	0.940	1.010	1.070	0.990
				Compactin	0.980	0.990	1.010	1.010	0.980	0.950	1.000
				KLA/Compactin	1.060	0.960	0.990	1.000	1.010	0.940	1.020

Wnt5a	KLA Compactin Compactin+KLA	NM_009524		wingless-related MMTV integration site 5A (Wnt5a), mRNA [NM_009524]	KLA	0.970	0.920	1.010	1.030	1.030	1.000	1.020
					Compactin	0.970	0.940	1.050	0.980	1.050	0.930	0.970
					KLA/Compactin	0.940	1.020	0.970	1.000	0.980	1.000	1.030

Wnt5b	KLA Compactin Compactin+KLA	NM_009525	wingless-related MMTV integration site 5B (Wnt5b), mRNA [NM_009525]	KLA	0.920	0.940	1.010	1.060	1.060	1.070	1.050
				Compactin	1.020	0.900	0.980	1.030	1.000	1.000	1.010
				KLA/Compactin	1.020	1.020	1.080	1.020	0.990	0.990	0.980

Wnt5b	KLA Compactin Compactin+KLA	NM_009525		wingless-related MMTV integration site 5B (Wnt5b), mRNA [NM_009525]	KLA	1.020	0.970	0.940	1.060	0.940	0.960	0.990
					Compactin	0.960	1.020	1.030	0.920	0.870	0.960	0.990
					KLA/Compactin	1.000	0.980	0.960	0.930	0.980	1.020	0.940

Wnt6	KLA Compactin Compactin+KLA	M89800	gb\|Mouse Wnt-6 mRNA, complete cds. [M89800]	KLA	0.990	0.950	1.280	1.450	1.210	1.250	1.460
				Compactin	0.910	0.930	1.030	1.170	1.020	1.040	1.240
				KLA/Compactin	0.970	0.940	1.170	1.600	1.470	1.740	1.660

Wnt6	KLA Compactin Compactin+KLA	NM_009526		wingless-related MMTV integration site 6 (Wnt6), mRNA [NM_009526]	KLA	0.880	0.940	1.320	1.550	1.300	1.350	1.210
					Compactin	0.860	0.980	1.080	0.990	1.080	1.160	1.430
					KLA/Compactin	0.830	0.940	1.440	1.670	1.350	1.840	1.510

Wnt7a	KLA Compactin Compactin+KLA	144227223	wingless-related MMTV integration site 7A	KLA	1.130	1.110	0.970	0.980	1.030	1.090	0.940
				Compactin	0.970	1.010	1.040	1.010	1.040	0.980	0.990
				KLA/Compactin	1.020	0.970	1.080	1.050	1.010	0.960	0.960

Wnt7a	KLA Compactin Compactin+KLA	NM_009527		wingless-related MMTV integration site 7A (Wnt7a), mRNA [NM_009527]	KLA	1.020	1.010	0.990	0.930	0.980	0.980	1.060
					Compactin	0.970	1.010	0.960	1.000	1.020	1.050	1.090
					KLA/Compactin	1.000	0.940	0.970	0.990	0.990	0.930	1.050

Wnt7b	KLA Compactin Compactin+KLA	NM_009528	wingless-related MMTV integration site 7B (Wnt7b), mRNA [NM_009528]	KLA	1.000	0.970	1.170	1.300	1.300	1.300	1.560
				Compactin	0.990	1.000	1.040	1.080	0.850	1.000	0.980
				KLA/Compactin	1.070	1.070	1.120	1.320	1.180	1.160	1.620

Wnt8a	KLA Compactin Compactin+KLA	NM_009290		wingless-related MMTV integration site 8A (Wnt8a), mRNA [NM_009290]	KLA	0.940	0.980	0.990	1.020	1.040	0.980	1.000
					Compactin	1.070	0.990	0.980	0.970	1.020	1.060	1.000
					KLA/Compactin	1.080	1.050	0.990	1.010	0.970	0.990	1.040

Wnt8b	KLA Compactin Compactin+KLA	NM_011720	wingless related MMTV integration site 8b (Wnt8b), mRNA [NM_011720]	KLA	0.910	0.940	0.990	1.020	0.980	0.970	1.060
				Compactin	1.010	0.970	1.020	0.970	1.050	0.970	0.980
				KLA/Compactin	1.010	1.040	1.010	1.010	1.040	0.990	1.020

Wnt9a	KLA Compactin Compactin+KLA	NM_139298		wingless-type MMTV integration site 9A (Wnt9a), mRNA [NM_139298]	KLA	0.960	1.030	0.960	0.990	1.070	1.050	1.010
					Compactin	1.050	1.000	0.960	0.980	1.050	1.010	1.040
					KLA/Compactin	0.950	0.970	1.050	1.090	0.960	1.030	0.980

Wnt9a	KLA Compactin Compactin+KLA	NM_139298	wingless-type MMTV integration site 9A (Wnt9a), mRNA [NM_139298]	KLA	1.040	1.000	1.020	0.930	1.030	1.070	1.020
				Compactin	0.980	0.940	1.030	0.950	0.990	1.060	1.020
				KLA/Compactin	0.970	0.980	1.020	0.930	1.050	0.910	1.030

Wnt9b	KLA Compactin Compactin+KLA	141801906		wingless-type MMTV integration site 9B	KLA	1.060	0.990	1.030	1.070	1.110	1.260	1.190
					Compactin	0.930	0.940	1.020	1.100	0.960	0.990	0.910
					KLA/Compactin	1.030	0.990	1.090	1.140	1.100	1.140	1.220

Wnt9b	KLA Compactin Compactin+KLA	NM_011719	wingless-type MMTV integration site 9B (Wnt9b), mRNA [NM_011719]	KLA	1.100	0.970	1.000	1.030	0.970	0.920	0.970
				Compactin	1.000	0.990	0.960	1.030	1.040	1.050	0.980
				KLA/Compactin	0.990	1.010	0.980	1.050	1.010	0.970	1.030

Zic2	KLA Compactin Compactin+KLA	NM_009574		zinc finger protein of the cerebellum 2 (Zic2), mRNA [NM_009574]	KLA	1.040	0.980	0.930	0.860	0.970	0.960	1.030
					Compactin	1.150	1.050	1.030	0.950	1.020	1.000	1.010
					KLA/Compactin	1.020	1.110	0.930	0.930	0.880	1.000	0.990

Microarray analysis of RAW 264.7 cells treated with Kdo2-lipid A (KLA) and compactin (full time course)

Kdo2-Lipid A / compactin gene array data - treatment:control ratios

KEGG pathway: Hedgehog signaling pathway (mmu04340)

Microarray analysis of RAW 264.7 cells treated with Kdo₂-lipid A (KLA) and compactin (full time course)

Kdo₂-Lipid A / compactin gene array data - treatment:control ratios